According to the BBC, John Summerfield is accused of failing to take reasonable care of pupils by taking them on to the roof of Sacred Heart Catholic College in Crosby, Merseyside.
The pupil, Joel Murray, 18, fell 8ft through a skylight, fracturing his skull, in August 2008.
Magistrates at South Sefton heard Mr Summerfield will deny the charge.
The head teacher’s barrister Patrick Cassidy said Mr Summerfield would be pleading not guilty and would be pleading not guilty and wanted to be tried by a crown court jury.
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